Genotypic Detection of rcsB, afaB, fim Hgenes Coding Biofilm Production of Escherichia Coli Isolated from Pressure Ulcer

Authors

  • Taghreed Abdul Kareem Al-Makhzoomy Department of Biology, Faculty of Science, University of Kufa, Iraq Author

DOI:

https://doi.org/10.61841/zy3yhp41

Keywords:

Escherichia Coli, rcsB, fimH, afabgenes

Abstract

Pressure ulcers, or bedsores, are localized injuries to the skin and/or underlying tissue that commonly commonlyhappen over a bony prominence. Infected pressure ulcers pose a great risk when left untreated; they can affect other body systems. The most common bacterial types found in infected ulcers are Pseudomonas aeruginosa , Escherichia coli , Staphylococcus aureus, and Staphylococcus hemolyticus. Therefore, 82 swabs were collected from patients suffering from bed ulcers and admitted to Al-Sader Medical City and Al-Hakim General Hospital during the term from November 2018 to February 2019. The specimens were refined in suitable media (MacConkey agar and nutrient agar). After the incubation period, the result revealed that 119 bacterial isolates were isolated and identified according to the Vitek-2 system; 57 (47.9%) of the isolates were gram positive, and 62 (52.1%) were gram negative. The gram negative were represented by 25 isolates of Escherichia coli, 12 of Klebsiella pneumoniae, 14 of Pseudomonas aeruginosa, 9 isolates of Proteus mirabilis, and one isolate each of Serratia ficaria and Pseudomonas fluorescens. Genetically, study the rcsB, afaB, and fimH genes encoding biofilm formation that are associated with the pathogenicity of Escherichia coli by using the PCR technique. The result of the present study reported that the fimH gene was found in 23 (92%) isolates of Escherichia coli, the afaB gene was found in 19 (76%) of Escherichia coli isolates, and the rcsB gene was found in 20 (80%) of Escherichia coli isolates. 

Downloads

Download data is not yet available.

References

[1] Campani, V., Pagnozzi, E., Mataro, I., Mayol, L., Perna, A., D’Urso, F., ... & De Rosa, G. (2018). Chitosan

Gel to Treat Pressure Ulcers: A Clinical Pilot Study. Pharmaceutics, 10(1), 15.

[2] Agrawal P., Soni S., Mittal G., Bhatnagar A. Role of polymeric biomaterials as wound-healing agents. Int.

J. Low Extrem. Wounds. 2014; 13:180–190.

[3] Mansan-Almeida, R., Pereira, A. L., & Giugliano, L. G. (2013). Diffusely adherent Escherichia coli strains

Isolated children and adults constitute two different populations. BMC microbiology, 13(1), 22

Microbiol 53:1437-1449.

[4] Brunel, A. S., Lamy, B., Cyteval, C., Perrochia, H., Téot, L., Masson, R., ... & Le Moing, V. (2016).

Diagnosing pelvic osteomyelitis beneath pressure ulcers in spinal cord injured patients: a prospective study.

Clinical Microbiology and Infection, 22(3), 267-e1.

[5] Dunyach-Remy, C., Gelis, A., Brunaud, M., Lavigne, J. P., & Sotto, A. (2018). Temporal evolution of

bacterial ecology of pressure ulcers in people with spinal cord injury. Annals of Physical and Rehabilitation

Medicine, 61, e384.

[6] Ravi, H. S., & Mehta, M. A. (2019). A study to assess the various factors and treatment modalities of

pressure sore in a tertiary care hospital. International Surgery Journal.

[7] Côrtes Thomé, A. M., da Silva Sergio, L. P., Orsini, M., de Freitas, M. R., Teixeira, S., Bastos, V. H., ... &

Teixeira de Seixas Filho, J. (2018).

[8] Ahmed, A., Satti, L., Zaman, G., Gardezi, A., Sabir, N., & Khadim, M. T. (2019). Catheter related recurrent

bloodstream infection caused by linezolid-resistant, methicillin resistant Staphylococcus haemolyticus; an

emerging superbug. JPMA.

[9] Alonso-Caballero, A., Schönfelder, J., Poly, S., Corsetti, F., De Sancho, D., Artacho, E., & Perez-Jimenez,

R. (2018). Mechanical architecture and folding of E. coli type 1 pilus domains. Nature communications,

9(1), 2758.

[10] Amaral, M. M., Girard, M. C., Álvarez, R. S., Paton, A. W., & Paton, J. C. (2018). Short Review on the

Protection by Ouabain of E. Coli Toxins. J Clin Exp Pathol, 8(340), 2161-0681.

[11] Xu, G., Guo, H., & Lv, H. (2019). Metabolomics Assay Identified a Novel Virulence-Associated

Siderophore Encoded by the high-pathogenicity island in uropathogenic Escherichia coli. Journal of

proteome research.

[12] Biran, D., & Ron, E. Z. (2018). Extraintestinal pathogenic Escherichia coli. In Escherichia coli, a

Versatile Pathogen (pp. 149-161). Springer, Cham.

[13] Majdalani N, Gottesman S. 2005. The RCS Rcsphosphorelay: a complex signal transduction system. Annu. Rev.

Microbiol. 59:379–405.

[14] Eom, S. H., Lee, D. S., Jung, Y. J., Park, J. H., Choi, J. I., Yim, M. J., ... & Lee, M. S. (2014). The

mechanism of antibacterial activity of phlorofucofuroeckol-A against methicillin-resistant Staphylococcus

aureus. Applied microbiology and biotechnology, 98(23), 9795-980.

[15] Prüß, B.M., Besemann, C., Denton, A., and Wolfe, A.J. (2006) J Bacteriol Rcs Bphosphorelay by the IgaA

Protein is a requisite for Salmonella virulence. Mol regulator RcsB regulates type 1 palliation in Escherichia coli. J Bacteriol 189:7159-7163.

[16] Grant, J., A. M. Wendelboe, A. Wendel, B. Jepson, P. Torres, C. Smelser, and R. T. Rolfs. 2008. Spinach-associated Escherichia coli O157:H7 outbreak, Utah and New Mexico, 2006. Emerg. Infect. Dis. 14:1633-1636.

[17] Andayani, N., J.C. Morales, M.R.J. Forstner, J. Supriatna, D.J. Melnick. (2001). Conservation Biology, 15(3):1545-1548. antibodies directed against type 1 fimbriae or complementary D-mannose receptors betabarrel proteins. Proc Natl Acad Sci U S A 111:E4350-4358. 1664.

[18] Frable, S., Beehan, D. P., Jacob, M., Rogers, A., Ellis, K. E., Von Dollen, K., ... & Lyle, S. K. (2018). Gene

Characterization of Biofilm-Forming Escherichia coli Equine Reproductive Tract Isolates. Journal of

Equine Veterinary Science, 66, 116.

[19] Tajbakhsh E, Ahmadi P, Abedpour-Dehkordi E, Arbab-Soleimani N, and Khamesipour F. 2016. Biofilm

formation, antimicrobial susceptibility, serogroups and virulence genes of uropathogenic coli isolated

from clinical samples in Iran. Antimicrobial Resistance and Infection Control (2016) 5:11.

[20] Waters, E. M., Rowe, S. E., O'Gara, J. P., & Conlon, B. P. (2016). Convergence of Staphylococcus aureus

Persister and biofilm research: Can biofilms be defined as communities of adherent persister cells?. PLoS

pathogens, 12(12), e1006012.

[21] Dolan R.M. and J. W. Costerton. 2002. Clinical Microbiology Review. 15:167.

[22] Aljana by AAJ and Alhasani AHA. 2016. Virulence factors and antibiotic susceptibility patterns of

multidrug resistance Klebsiella pneumoniae isolated from different clinical infections. Microbiol Res

2016; 10(22):829-843.

[23] Fang, N., Yang, H., Fang, H., Liu, L., Zhang, Y., Wang, L., et al. (2015). RcsAB is a major repressor of

Yersinia biofilm development through directly acting on hmsCDE, hmsT, and hmsHFRS. Sci. Rep.

5:9566...

[24] Schwan, W. R., Shibata, S., Aizawa, S. I., & Wolfe, A. J. (2007). The two-component response regulator

RcsB regulates type 1 palliation in Escherichia coli. Journal of Bacteriology, 189(19), 7159-7163.

[25] Huang YH , Ferrieres L , Clarke DJ . 2006 ; The role of the Rcsphosphorelay in Enterobacteriaceae. Res

Microbiol . 157 : 206–212.

[26] Ferrières, L., & Clarke, D. J. (2003). The RcsC sensor kinase is required for normal biofilm formation in

Escherichia coli K‐12 and controls the expression of a regulon in response to growth on a solid surface.

Molecular microbiology, 50(5), 1665-1682.

[27] Clarke, D. J. (2010). The RCS Rcsphosphorelay: more than just a two-component pathway. Future

microbiology, 5(8), 1173-1184 Low laser therapy (photobiomodulation) on bacteria of pressure ulcers: in

vitro studies. FisioterapiaBrasil, 19(3).

[28] Krin, E., Danchin, A., & Soutourina, O. (2010). RcsB plays a central role in H-NS-dependent regulation of

motility and acid stress resistance in Escherichia coli. Research in microbiology, 161(5), 363-371.

[29] Labigne-Roussel, A., M. A. Schmidt, W. Walz, and S. Falkow. 1985. Genetic organization of the

afimbrial operon and nucleotide sequence from a uropathogenic Escherichia coli gene encoding an

afimbrial adhesin. J. Bacteriol. 162:1285-1292.

[30] Pham, T. Q., P. Goluszko, V. Popov, S. Nowicki, and B. J. Nowicki. 1997. Molecular cloning and

characterization of Dr-II, a nonfimbrialadhesin-I-like adhesin isolated from gestational pyelonephritis-associated Escherichia coli that binds to decay-accelerating factor. Infect. Immun. 65:4309-4318.

[31] Gérardin, J., Lalioui, L., Jacquemin, E., Le Bouguénec, C., & Mainil, J. G. (2000). The afa-related gene

Cluster in necrotoxigenic and other Escherichia coli from animals belongs to the afa-8 variant. Veterinary

microbiology, 76(2), 175-184.

[32] Ishitoya, S., Yamamoto, S., Kanamaru, S., Kurazono, H., Habuchi, T., Ogawa, O., & Terai, A. (2003).

Distribution of afa adhesins in Escherichia coli isolated from Japanese patients with urinary tract

infection. The Journal of Urology, 169(5), 1758-1761.

[33] Sokurenko EV, Feldgarden M, Trintchina E, Weissman SJ, Avagyan S, Chattopadhyay S, 2004. Selection

Footprint in the Fim Hadhesin shows pathoadaptive niche differentiation in Escherichia coli. MolBiolEvol.

2004;21(7):1373–83.

[34] Zhao, L., Chen, X., Zhu, X., Yang, W., Dong, L., Xu, X., et al. 2009. Prevalence of virulence factors and

antimicrobial resistance of uropathogenic Escherichia coli in Jiangsu province (China). Urology 74. 707-

702.

[35] Yun K. W., Hak Young Kim, HeeKuk Park, Wonyong Kim, and In Seok Lim. 2014. Virulence factors of uropathogenic Escherichia coli in urinary tract infections and asymptomatic bacteremia in children. Journal of Microbiology, Immunology, and Infection 47, 455-461.

[36] Cusick, K., Lee, Y. Y., Youchak, B., & Belas, R. (2012). Perturbation of FliL interferes with Proteus mirabilis swarmer cell gene expression and differentiation. Journal of Bacteriology, 194(2), 437-447.

[37] Erjavec, M. S., Rijavec, M., Križan-Hergouth, V., Fruth, A., & Žgur-Bertok, D. (2007). Chloramphenicol- and tetracycline-resistant uropathogenic Escherichia coli (UPEC) exhibit reduced virulence potential. International Journal of Antimicrobial Agents, 30(5), 436-442.

Downloads

Published

31.07.2020

How to Cite

Abdul Kareem Al-Makhzoomy, T. (2020). Genotypic Detection of rcsB, afaB, fim Hgenes Coding Biofilm Production of Escherichia Coli Isolated from Pressure Ulcer. International Journal of Psychosocial Rehabilitation, 24(5), 5161-5167. https://doi.org/10.61841/zy3yhp41